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Mon, 21 Jul 2008

affyPLM
(1.17.1) Fix typo in get.psi.code (Geman-McClure issue)
(see http://article.gmane.org/gmane.science.biology.informatics.conductor/19075)

[/affyPLM] permanent link

Wed, 30 Apr 2008

affyPLM
Updating the version number for the trunk post-BioC 2.2 release.
Updating the version number for the BioC 2.2 release.

[/affyPLM] permanent link

Wed, 02 Apr 2008

affyPLM
(1.15.10) affyPLM now requires preprocessCore (>=1.1.7)
(1.15.9) rma background correction code from preprocessCore is now used
source files rma_background2.c and rma_background2.h have been removed

[/affyPLM] permanent link

Tue, 01 Apr 2008

affyPLM
(1.15.9) rma background correction code from preprocessCore is now used
source files rma_background2.c and rma_background2.h have been removed

[/affyPLM] permanent link

Tue, 25 Mar 2008

affyPLM
House Cleaning: Removing INDEX files from svn. These files are created in the build process and shouldn't be version controlled.

[/affyPLM] permanent link

Sun, 16 Mar 2008

affyPLM
(1.15.8) Remove the source file weightedkerneldensity.c which was not being used by any other code in any way. In otherwords, its removal will have no effect for users of the package.

[/affyPLM] permanent link

Wed, 12 Mar 2008

affyPLM
Use the recently added Rzlib library in R-devel on Windows.

[/affyPLM] permanent link

Thu, 28 Feb 2008

affyPLM
Updated CHANGELOG to reflect changes to 1.15.6.
Replaced reference to soon to be defunct class exprSet with ExpressionSet.

[/affyPLM] permanent link

Mon, 04 Feb 2008

affyPLM
(1.15.5) fix show(Pset) and summary(Pset) which were slightly broken.

[/affyPLM] permanent link

Sun, 02 Dec 2007

affyPLM
(1.15.4) Removed fitPLM.old, PLM.designmatrix, PLM.designmatrix2 which were all legacy defuct functions.
(1.15.3) Fixed very minor typo in vignette

[/affyPLM] permanent link

Sat, 01 Dec 2007

affyPLM
(1.15.3) Fixed very minor typo in vignette
(1.15.2) Remove some legacy C code from do_PLMrlm.c. This code was not part of the workflow for any user constructed fitPLM call. Removing it should help improve maintainability.

[/affyPLM] permanent link

Sat, 03 Nov 2007

affyPLM
(1.15.1) Add an appropriate CITATION file

[/affyPLM] permanent link