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Bioconductor Changlog.
Wed, 30 Apr 2008
XDE
Updating the version number for the trunk post-BioC 2.2 release.
Updating the version number for the BioC 2.2 release.
XDE
fixed bug in .integrativeCorrleationFilter
XDE
this fixes the bug in the XDE vignette. For some reason running 3 iterations of the model produces a warning, so this code chunk is no longer evaluated
XDE
updated vignette pdfs
XDE
added documentation for xapply. Still warning messages in the vignette
XDE
added documentation for xapply. Still warning messages in the vignette
added warning message for low c2 (median < 0.01).
updated vignettes. Only doing a burnin -- no log files are written to file
XDE
bumped version
added documenation for calculatePosteriorAvg
added documentation. Documentation for delta_gp model in the XdeParameterClass vignette is still needed
XDE
bumped version to signal release. Started adding methods for delta_gp model
XDE
changes in R wrapper for C code for implementing the multiple delta model
XDE
changes in R wrapper for C code for implementing the multiple delta model
XDE
corrected in diffExpressed_main.cpp that all arguments must be called by reference
XDE
corrected a small typo in xdeLIN.pdf
Implemented delta_{gp}
XDE
changed link for AssayData in man/ExpressionSetList-class
XDE
changed the defaults for initialization of XdeParameter -- by default, no burnin, 1000 iterations. evaluate sessionInfo in vignette -- updated vignette
XDE
fixed bug in symbolsInteresting function. Added a check for missing values in xde.R. Changed the initialization method for XdeParameter class slightly
XDE
This adds the new package XDE to the bioconductor repository.