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Bioconductor Changlog.
Tue, 13 Oct 2009
Rgraphviz
Some bug fixes and a new vignette for the graph rendering API
Rgraphviz
Revised the build system so it supports Graphviz >= 2.21 need to use Graphviz on 64 bit Vista. Updated the Windows configure system to support 2.21. Edited the README file to update installation instructions. Made sure that all platforms have a Rgraphviz:::.graphviz_build_version variable so that Rgraphviz can check if (pseudo code) graphviz_build_version == graphviz_install_version. This ought to be useful on all platforms using binary building, notably OS X. Changed the output of graphvizVersion to be a list with install_version and build_version components of type numeric_version
Rgraphviz
Revised the build system so it supports Graphviz >= 2.21 need to use Graphviz on 64 bit Vista. Updated the Windows configure system to support 2.21. Edited the README file to update installation instructions. Made sure that all platforms have a Rgraphviz:::.graphviz_build_version variable so that Rgraphviz can check if (pseudo code) graphviz_build_version == graphviz_install_version. This ought to be useful on all platforms using binary building, notably OS X. Changed the output of graphvizVersion to be a list with install_version and build_version components of type numeric_version
Rgraphviz
fixed a buglet where an attempt to set cex to 0 could occur
Rgraphviz
Major refactoring of configure.in and configure (turns out that configure had not been updated despite configure.in being updated earlier. Hopefully this works, but has not been tested with a pkg-config installation. Fixed an example in agopenSimple.Rd
Rgraphviz
Two fixes made:
1) Fixed a typo in a help file's \usage tag.
2) Added code to the .onLoad function to manage dll name conflicts with graph package.
Rgraphviz
notes for OSX installation
Rgraphviz
implementing filled arrow heads and setting them to be the default
Rgraphviz
more to prepare for graphviz 2.15 on windows
prepare for graphviz 2.15 on windows
Rgraphviz
Bumped pkg versions for BioC 2.5 devel line.
Bumped pkg versions for BioC 2.4 release.
Rgraphviz
Fixed a logical bug whereby flags set by pkg-config were being overwritten in configure.in
Rgraphviz
Bumping version numbers for BioC 2.4 devel.
Bumping version numbers for BioC 2.3 release.
Rgraphviz
Updating the README file to reflect current version of graphviz.
Cleaned up Rgraphviz to work with latest version of graph. (graph had to change the name of its dll to not conflict with graphviz dll.)
Rgraphviz
correct Rd issues found by Rdversion 2 parser
Rgraphviz
Direct users to README in DESCRIPTION
Rgraphviz
moved classes and generics in separate files and added collate field
Rgraphviz
graphviz 2.16 is not good
Rgraphviz
Fixed some issues related to using graphviz 2.22 on Windows
Rgraphviz
be more clearer in example dir
fixed a bug in renderGraph that crashed when main or sub were set to Null
Rgraphviz
set environment var path for Windows
build on Windows using graphviz 2.15
Rgraphviz
a number of fixes and additions to allow for various different node shapes. This is not functional yet...
Rgraphviz
bumping version number
added note to documentation about lwd behavior in renderGraph
Further updates to README
Rgraphviz
allow pdf-output in toFile
Rgraphviz
bug fix in layoutGraphviz
Rgraphviz
making sure we keep the correct aspect ratio when adding title or subtitle to a rendered graph
adding pixel coordinates of nodes to the renderInfo slot. This can will be used by the imageMap method in package biocGraph
Rgraphviz
Fixing a issue on Windows, where a script file was being creating to store the graphviz version number.
Rgraphviz
Minor change to readme file.
Rgraphviz
not unsupported anymore on liverpool
Rgraphviz
fixed warnings about missing import statements
Rgraphviz
user-defined nodes and edge arroheads and the accompanying documentation
Rgraphviz
Cleaned up changes to Rgraphviz that enable usage on Windows.
Rgraphviz
Fixed a logical bug whereby flags set by pkg-config were being overwritten in configure.in
Rgraphviz
Updating the version number for the trunk post-BioC 2.2 release.
Updating the version number for the BioC 2.2 release.
Rgraphviz
fixed a bug in read.FCS which caused invalid spillover matrices
Rgraphviz
fixing docs
Rgraphviz
Change maintainer
Rgraphviz
Fixed a configure bug, updated README
Rgraphviz
fixed a little bug that caused layoutGraph to crash for certain combinations of node shapes
Rgraphviz
Using Kjell Konis's suggested distribution of graphviz on Windows.