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Bioconductor Changlog.
Tue, 13 Oct 2009
HilbertVisGUI
first check-in after split of HilbertCurveDisplay in HilbertVis and
HilbertVisGUI
[/HilbertVisGUI] permanent link
HilbertVisGUI
Reformatted the Licence information in DESCRIPTION files to bring them into compliance.
[/HilbertVisGUI] permanent link
HilbertVisGUI
moved BidirColorizer to src/
[/HilbertVisGUI] permanent link
HilbertVisGUI
Reformatted the Licence information in DESCRIPTION files to bring them into compliance.
[/HilbertVisGUI] permanent link
HilbertVisGUI
Changed order in PKG_CONFIG_PATH in Makevars to get the right stuff first for Mac
[/HilbertVisGUI] permanent link
HilbertVisGUI
Adding support for Mac OS X for HilbertVis and HilbertVisGUI.
[/HilbertVisGUI] permanent link
HilbertVisGUI
changes to stand-alone version, preparing for GUI-based loading of data
[/HilbertVisGUI] permanent link
HilbertVisGUI
- hilbertDisplay and hilbertDisplayThreeColor now accept
Rle vectors (from IRanges)
- hilbertDisplayThreeColor now deals more sensibly with
data of different length
- the GUI understands the mnemonic keys Alt-P and Alt-N to
cycle through the data vectors
[/HilbertVisGUI] permanent link
HilbertVisGUI
undo accidental change
- save button for R version
- minro changes
[/HilbertVisGUI] permanent link
HilbertVisGUI
added funding acknowledgement to About dialog
[/HilbertVisGUI] permanent link
HilbertVisGUI
corrected nasty bug in BidirColorizer which made data between -1 and 0 appear as 0
[/HilbertVisGUI] permanent link
HilbertVisGUI
added CITATION file
[/HilbertVisGUI] permanent link
HilbertVisGUI
This is also part of Maq's header files
We need this header file here, too.
[/HilbertVisGUI] permanent link
HilbertVisGUI
added "\usepackage{Sweave}"
[/HilbertVisGUI] permanent link
HilbertVisGUI
dummy
[Dummy change]
NOTE: Many of the commits prior to this message are wrongly attributed to 'whuber'
although everything should be attributed to 's.anders'. (I don't quite know how
Wolfgang's authentication information ended up in my home dir.)
[/HilbertVisGUI] permanent link
HilbertVisGUI
added note that mac version is broken
[/HilbertVisGUI] permanent link
HilbertVisGUI
Application icon for MS Win
added icon for windows
Makefile corr
Version to 1.5.1.1
foo
Corrected bug in find_word
[/HilbertVisGUI] permanent link
HilbertVisGUI
added step_vector
sequence choosing for GFF implemeneted
[/HilbertVisGUI] permanent link
HilbertVisGUI
put a 'try' around the call to 'hilbertDisplay' to aviod an error in a check without working X
added proper handling of missing X display
[/HilbertVisGUI] permanent link
HilbertVisGUI
Icon added
[/HilbertVisGUI] permanent link
HilbertVisGUI
Sequence length can now be indicated
changes for standalone: loading of data works fine now
changes for standalone only: introduced EmptyColorizer, removed command line parameter parsing
binning now optimized
[/HilbertVisGUI] permanent link
HilbertVisGUI
Bumped pkg versions for BioC 2.5 devel line.
Bumped pkg versions for BioC 2.4 release.
[/HilbertVisGUI] permanent link
HilbertVisGUI
changed binary file name to 'hilbertvis'
added version number
Unloading works now
full_length is now constant over all displayed curves
Maq map loading now works
[/HilbertVisGUI] permanent link
HilbertVisGUI
m
minor
.
minor change
minor chaneg
changes to improve support for Mac
[/HilbertVisGUI] permanent link
HilbertVisGUI
updated INSTALL files
corr
changed text
added installation instructions for gtkmm, displayed automatically in case of
failure to load DLL
[/HilbertVisGUI] permanent link
HilbertVisGUI
- corrected a simple mistake I introduced yesterday that broke build on
Windows
- some work in stand-alone part
[/HilbertVisGUI] permanent link
HilbertVisGUI
Now everything works find on Mac, at last
[/HilbertVisGUI] permanent link
HilbertVisGUI
corrected a POSIX-violating shell construct in configure script
[/HilbertVisGUI] permanent link
HilbertVisGUI
small change to configure script: Now reports an error if
gtkmm-2.4 is older than version 2.12
[/HilbertVisGUI] permanent link
HilbertVisGUI
still mistakes in the namespace, I hope, now it's fine
corr
corr
[/HilbertVisGUI] permanent link
HilbertVisGUI
Bumping version numbers for BioC 2.4 devel.
Bumping version numbers for BioC 2.3 release.
Removing support for Mac OS X for now.
Using the GTKMM_BASEPATH environment variable.
[/HilbertVisGUI] permanent link
HilbertVisGUI
corr URL in DESRIPTION
[/HilbertVisGUI] permanent link
HilbertVisGUI
load_wiggle_data implemented
load_wiggle_toc added
[/HilbertVisGUI] permanent link
HilbertVisGUI
Palette darker/lighter buttons for R version added
[/HilbertVisGUI] permanent link
HilbertVisGUI
changes all *.h header files to c* to work around a bug in g++ on Tiger
[/HilbertVisGUI] permanent link
HilbertVisGUI
lin plot windows close now on unloading of their data
linplot for stand-alone
[/HilbertVisGUI] permanent link
HilbertVisGUI
Moving HilbertCurveDisplay to HibertVisGUI and creating HibertVis per Simon Anders's request.
[/HilbertVisGUI] permanent link
HilbertVisGUI
Adding support for Mac OS X for HilbertVis and HilbertVisGUI.
[/HilbertVisGUI] permanent link