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GeneRegionScan
Corrected misleading feedback in geneRegionScan() function

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GeneRegionScan
-updated documentation of addSnpPdata to match previous update
- updated the addSnpPdata function so that it can now take individual names from pData columns. This is useful in sets such as the GSE9372 where all samples are in triplicates. This update also allowed to delete the horrible addHapMapSnpPdata function.

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GeneRegionScan
Added scanDate slot to Biobase's eSet class, added functionality in affy to utilize the new scanDate slot and updated all the packages that create direct subclasses of eSet, ExpressionSet or NChannelSet.

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GeneRegionScan
- improved abstract() of the expressionset output from getLocalMetaprobeIntensities

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GeneRegionScan
Changed version number to indicate that it is ready for publishing

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GeneRegionScan
-corrected missing shQuote around the metaProbeSetsFile variable in getLocalMetaprobeIntensities

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GeneRegionScan
Fixed a man page issue involving a list of DNAString objects.

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GeneRegionScan
Removed scanDate slot from eSet and replaced it with protocolData slot. Also updated eSet objects and bumped package version numbers.

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GeneRegionScan
Bumped pkg versions for BioC 2.5 devel line.
Bumped pkg versions for BioC 2.4 release.

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GeneRegionScan
Added package GeneRegionsScan to svn

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GeneRegionScan
Reformatted the Licence information in DESCRIPTION files to bring them into compliance.

[/GeneRegionScan] permanent link

GeneRegionScan
Reformatted the Licence information in DESCRIPTION files to bring them into compliance.

[/GeneRegionScan] permanent link

GeneRegionScan
Removed scanDate slot from eSet and replaced it with protocolData slot. Also updated eSet objects and bumped package version numbers.
-improved error message in translateSampleNames function

[/GeneRegionScan] permanent link

GeneRegionScan
- re-created memorization of much-used-file locations, since it is clear that text file reading-and-writing in package directiony is a widespread way to approach this (OneChannelGui etc)
- added citation file, since the paper descriping the function was accepted

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