Bioconductor Changelog

Bioconductor Changelog

	About Click here to learn more about this blog. Packages Click on a link for updates to that package only. egionScan fold Subscribe Subscribe to the Bioconductor Changlog.	Thu, 18 Jun 2009 GeneRegionScan Added scanDate slot to Biobase's eSet class, added functionality in affy to utilize the new scanDate slot and updated all the packages that create direct subclasses of eSet, ExpressionSet or NChannelSet. [/GeneRegionScan] permanent link Fri, 29 May 2009 GeneRegionScan -corrected missing shQuote around the metaProbeSetsFile variable in getLocalMetaprobeIntensities [/GeneRegionScan] permanent link Fri, 15 May 2009 GeneRegionScan -updated documentation of addSnpPdata to match previous update - updated the addSnpPdata function so that it can now take individual names from pData columns. This is useful in sets such as the GSE9372 where all samples are in triplicates. This update also allowed to delete the horrible addHapMapSnpPdata function. [/GeneRegionScan] permanent link Sat, 25 Apr 2009 GeneRegionScan - re-created memorization of much-used-file locations, since it is clear that text file reading-and-writing in package directiony is a widespread way to approach this (OneChannelGui etc) - added citation file, since the paper descriping the function was accepted [/GeneRegionScan] permanent link Tue, 21 Apr 2009 GeneRfold Bumped pkg versions for BioC 2.5 devel line. Bumped pkg versions for BioC 2.4 release. [/GeneRfold] permanent link GeneRegionScan Bumped pkg versions for BioC 2.5 devel line. Bumped pkg versions for BioC 2.4 release. [/GeneRegionScan] permanent link GeneR Bumped pkg versions for BioC 2.5 devel line. Bumped pkg versions for BioC 2.4 release. [/GeneR] permanent link Thu, 09 Apr 2009 GeneRegionScan Fixed a man page issue involving a list of DNAString objects. [/GeneRegionScan] permanent link Tue, 07 Apr 2009 GeneRegionScan Changed version number to indicate that it is ready for publishing [/GeneRegionScan] permanent link Fri, 03 Apr 2009 GeneRegionScan Added package GeneRegionsScan to svn [/GeneRegionScan] permanent link Thu, 05 Feb 2009 GeneRfold fixed Rd version 2 parser warnings [/GeneRfold] permanent link GeneR fixed Rd version 2 parser warnings [/GeneR] permanent link Wed, 22 Oct 2008 GeneRfold Bumping version numbers for BioC 2.4 devel. Bumping version numbers for BioC 2.3 release. [/GeneRfold] permanent link GeneR Bumping version numbers for BioC 2.4 devel. Bumping version numbers for BioC 2.3 release. [/GeneR] permanent link Mon, 20 Oct 2008 GeneRfold Bumping the version number for release prep. [/GeneRfold] permanent link Fri, 19 Sep 2008 GeneR make it compile on openSUSE 11.0/gcc 4.3.1 [/GeneR] permanent link Wed, 30 Apr 2008 GeneR Updating the version number for the trunk post-BioC 2.2 release. Updating the version number for the BioC 2.2 release. [/GeneR] permanent link GeneRfold Updating the version number for the trunk post-BioC 2.2 release. Updating the version number for the BioC 2.2 release. [/GeneRfold] permanent link Tue, 25 Mar 2008 GeneR House Cleaning: Removing INDEX files from svn. These files are created in the build process and shouldn't be version controlled. [/GeneR] permanent link GeneRfold House Cleaning: Removing INDEX files from svn. These files are created in the build process and shouldn't be version controlled. [/GeneRfold] permanent link Sat, 22 Mar 2008 GeneRfold Removing support for building GeneRfold on Windows due to its reliance on ViennaRNA library. [/GeneRfold] permanent link Fri, 21 Mar 2008 GeneR Removed reference to non-existent header file from src/readLocation.cc. [/GeneR] permanent link