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Tue, 13 Oct 2009

CGHcall
Bumping version numbers for BioC 2.4 devel.
Bumping version numbers for BioC 2.3 release.

[/CGHcall] permanent link

CGHcall
cghRaw, cghSeg and cghCall classes and methods added
Removed X + Y chromosomes.
Added end positions.
Added end positions.

[/CGHcall] permanent link

CGHcall
Upgrade to CGHcall 2.0

[/CGHcall] permanent link

CGHcall
Bumped pkg versions for BioC 2.5 devel line.
Bumped pkg versions for BioC 2.4 release.

[/CGHcall] permanent link

CGHcall
reverted to previous version
added a % to commented sections in examples containing \code commented with ##

[/CGHcall] permanent link

CGHcall
Added centromere data for sex chromosomes.

[/CGHcall] permanent link

CGHcall
fixed warning: \code{} inside code block such as \examples{}

[/CGHcall] permanent link

CGHcall
Export class methods added.
Fixed bug with nclass=4

[/CGHcall] permanent link

CGHcall
Updating the version number for the trunk post-BioC 2.2 release.
Updating the version number for the BioC 2.2 release.

[/CGHcall] permanent link

CGHcall
Documentation bug
Added data sorting in preprocess function.

[/CGHcall] permanent link

CGHcall
Probamp bug fixed

[/CGHcall] permanent link

CGHcall
Fixed: .makeRegions did not assign a new region at the start of a new chromosome

[/CGHcall] permanent link

CGHcall
Reformatted the Licence information in DESCRIPTION files to bring them into compliance.

[/CGHcall] permanent link

CGHcall
Changed biocViews DNACopyNumber to CopyNumberVariants and SNPsAndGeneticVariability to SNP, GeneticVariability.

[/CGHcall] permanent link

CGHcall
fixed mismated documentation and syntax errors in the man pages.
bumped up version number to 2.5.1.

[/CGHcall] permanent link

CGHcall
fixed mismated documentation and syntax errors in the man pages.
bumped up version number to 2.5.1.

[/CGHcall] permanent link

CGHcall
Reformatted the Licence information in DESCRIPTION files to bring them into compliance.

[/CGHcall] permanent link