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Biostrings
Added support for logical vectors when subsetting PairwiseAlignment and AlignedXStringSet objects.
Slight refactor to mismatch method for PairwiseAlignment object to improve performance.
Fixed a bug in mismatch method for objects of class PairwiseAlignment.
[/Biostrings]
permanent link
VanillaICE
changed one line in vignette
added copyNumber.scale option. needs to be a standard deviation on the appropriate scale
[/VanillaICE]
permanent link
graph
fix .ftM2other() for "self-edges"
[/graph]
permanent link
BiocCaseStudies
no non-db annotation packages left
[/BiocCaseStudies]
permanent link
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