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Bioconductor Changlog.
Wed, 04 Jun 2008
rsbml
Remove these two temporary files from the repository.
Missing updates.
SOSLib support now only built by default if prequisites are met. If explicitly requested and prequisites fail, we generate an error. Explicit disabling is also supported.
Give informative error when simulate() is called on a build without SOSLib support.
Fix rsbml_graph so that it does not use the deprecated edgemode slot.
affyPara
vignette update
Biostrings
Another change to the CWdna_PDict class (the @dups slot is back, the SparseList are gone, @dups is now of type Dups and is twice bigger than the old @dups) in order to fix PDict() performance issue when the input dictionary contains highly repetitive reads. Version bumped to 2.9.18
xcms
missed ramp.h
missed ramp_base64.h
Restored some (most?) xcmsFragments functionality
Promote stable 1.12.1 to 1.13.3
Version Bump just before resurrection of xcms-1.12.1
biocViews
Minor change to extractNAMESPACEFromTarball. Explicitly use the --wildcards flag to tar command call.
rtracklayer
Use better names for the tracks resulting from the strand split when exporting WIG.
apComplex
i have changed the YEAST annotation package to org.Sc.sgd.db
Biobase
openPDF checks for pdfviewer NULL or ''