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ABarray
ACME
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AffyExpress
AnnBuilder
AnnotationDbi
ArrayExpress
BAC
BCRANK
BGmix
BSgenome
BioMVCClass
Biobase
BiocCaseStudies
Biostrings
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BufferedMatrix
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Category
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EBImage
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RLMM
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ROC
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Ruuid
SAGx
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SNPchip
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ShortRead
TypeInfo
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aCGH
adSplit
affxparser
affy
affyPLM
affyPara
affyQCReport
affycomp
affycoretools
affyio
affylmGUI
affypdnn
altcdfenvs
annaffy
annotate
annotationTools
apComplex
aroma.light
arrayMagic
arrayQuality
arrayQualityMetrics
beadarray
beadarraySNP
bgafun
bgx
bioDist
biocGraph
biocViews
biomaRt
bridge
buildBioC
cellHTS
cellHTS2
cghMCR
clusterStab
codelink
convert
copa
cosmo
cosmoGUI
ctc
daMA
diffGeneAnalysis
ecolitk
edd
exonmap
explorase
externalVector
factDesign
fbat
fdrame
flowClust
flowCore
flowQ
flowUtils
flowViz
gaga
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gcrma
genArise
geneRecommender
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globaltest
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graph
hexbin
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idiogram
impute
keggorth
lapmix
limma
limmaGUI
logicFS
lumi
maCorrPlot
maDB
maSigPro
maanova
macat
made4
maigesPack
makePlatformDesign
makecdfenv
marray
matchprobes
mdqc
metaArray
multtest
ncdfExts
nem
nnNorm
nudge
occugene
oligo
oligoClasses
oneChannelGUI
ontoTools
pairseqsim
pamr
panp
pathRender
pcaMethods
pcot2
pdInfoBuilder
pdmclass
pgUtils
pickgene
pkgDepTools
plateCore
plgem
plier
plw
ppiStats
prada
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prism
puma
quantsmooth
qvalue
rHVDM
rama
rbsurv
reb
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rhdf5
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rtracklayer
safe
sagenhaft
seqLogo
sigPathway
siggenes
simpleaffy
simulatorAPMS
sizepower
smoothMiner
snapCGH
snpMatrix
spikeLI
spkTools
splicegear
splots
spotSegmentation
sscore
ssize
stam
stepNorm
tilingArray
timecourse
tkWidgets
topGO
twilight
vbmp
vsn
weaver
webbioc
widgetInvoke
widgetTools
xcms
xcmsGUI
xps
yaqcaffy

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GGtools
improved class connecting to GGBase
move out old Rnw
fixups depend on GGBase
fixups to depend on GGBase
fixups to rely on GGBase

[/GGtools] permanent link

arrayQuality
AP: fixed bug in qcScore and updated help file

[/arrayQuality] permanent link

GGBase
now the CEU snp locations are in GGBase
inits for netCDF
fixup
fixup

[/GGBase] permanent link

xps
update to version xps-0.99.10
- update source code to handle tmpdir correctly on WinXP
- update examples script4xps.R and script4exon.R
- update README

[/xps] permanent link