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Sun, 23 Mar 2008
GEOquery
fixed parseGSE when GSEMatrix=FALSE to use textConnections again; was failing to adjust for _table_end stuff
affxparser
Moved readPgf, readClf to *Env, added readPgf,readClf,readClfHeader,readPgfHeader. These now return lists and use an indices argument to specify which probesets should be read. The value of these over the environment function is questionable.
updated to Fusion 1.0.10b
xps
update to version xps-0.99.3
- added files: config.win, Makefile.win, findroot.pl, findvc.pl
- package can now be built for Windows XP
- added possibility to add current date and/or time to root filename
- added function existsROOTFile
- updated vignette xps.Snw
- updated files: README, ACKNOWLEDGMENT