GSEABase
Added mapIdentifers,AnnotationIdentifier,AnnotationIdentifer-method as null map
[/GSEABase]
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Biostrings
cosmetic
- Added the intToIntervals(), intToAdjacentIntervals() and narrow() functions for
creating or modifying IntIntervals objects. Those functions together with the
restrict() function added previously are used by the BStringList() and BStringSet()
constructors and family.
- Fixed a nasty bug in the narrow_BStringList() C function.
- Some additions and improvements at the C level.
- No version bump yet.
[/Biostrings]
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BufferedMatrixMethods
(1.3.5) Fix a bug caused by the previous commenting out correction in 1.3.4 (was incorrectly commenting out a larger block due to a "/*" rather than "*/"
[/BufferedMatrixMethods]
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affy
Apparent keyboard short-cut accident in earlier commit.
Unexplainable FORTRAN error here, preventing me from going
through the complete R CMD check.
Fixed propagation of changes in subsetting.
[/affy]
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plateCore
Still working on basic documentation.
[/plateCore]
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XDE
fixed bug in symbolsInteresting function. Added a check for missing values in xde.R. Changed the initialization method for XdeParameter class slightly
[/XDE]
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