About
Click here
to learn more about this blog.
Packages
Click on a link
for updates to that package only.
Subscribe
Subscribe to the
Bioconductor Changlog.
Thu, 14 Feb 2008
AnnotationDbi
started a TODO list here
[/AnnotationDbi] permanent link
limma
13 February 2008: limma 2.13.4
- all uses of I() in data.frame() arguments removed and replaced
with stringsAsFactors=FALSE. This ensures that the appropriate
columns in data.frames will have class "character" instead of
"AsIs".
- arrayWeights() now gives nice error message if the number of
arrays is too few to give statistically useful results.
annotationTools
updated CITATION file
[/annotationTools] permanent link
Biostrings
some cosmetic changes and a version bump
Added more basic documentation of the Biostrings C interface (thru commenting Biostrings_interface.h and Biostrings_defines.h). Version bump -> 2.7.21
ArrayExpress
Add functions, help files, namespace and vignette
[/ArrayExpress] permanent link
annotate
Small changes to the htmlpage() help page to hopefully make things less opaque.
explorase
Fix NAMESPACE importing now nonexistent package biocola.
affyio
(1.7.12) Fixes for C level command console format CEL file parsing. In particular the functions generic_get_detailed_header_info() and gzgeneric_get_detailed_header_info() had problems in some situations where various algorithm parameters were not stored as character strings.
arrayQualityMetrics
Fix setwd of NChannelSet
[/arrayQualityMetrics] permanent link