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Bioconductor Changlog.
Fri, 26 Oct 2007
AnnotationDbi
Modified schema definitions to match 1.0
These schema definitions should now match what is planned for 1.0
including my new tables for ensembl and flybase_cg.
This adds files that were previously missing from the 1.0 schemas.
These still need more changes to be full 1.0 compliant. But at least
now they are here.
Update the schemas for human and rodents for new tables.
Added ensembl tables to these schemas so I have to also add this into
the schema definition.
Added maps for Flybase CG IDs and ensembl.
These changes add maps and fine tune the man pages for the ensemble
and the flybase CG IDs. Now users should be able to easily get the
IDs used by ensembl for mammals and fly packages.
Adds the man pages for the ensembl maps.
This just adds man pages for the planned ensembl maps with changes and
concessions as appropriate to context of whether its a chip package or
an organism based one.
Adds man pages for the new FLYBASE CG maps.
This adds a man page to the FLYCHIP.DB and the FLY.DB packages with
appropriate concessions.
[/AnnotationDbi] permanent link
MLInterfaces
fixup
various changes to doc and to improve propagation in xvalSpec applications
[/MLInterfaces] permanent link
rsbml
supported again on wellington
flowCore
Fixed expressionFilter. It can now be used programatically as well
added two columns to parameters data frame: minRange and maxRange. These are now the actual instrument measurement ranges and we make sure that they are updated after transformations
GraphAT
supported again on wellington
maigesPack
Changing maintainer email adress
pathRender
better title
biomaRt
Ensembl update to version 47
oligo
Fixing docs