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Packages Click on a link for updates to that package only. ABarray ACME AffyCompatible AffyExpress AffyTiling Agi4x44PreProcess AnnBuilder AnnotationDbi ArrayExpress ArrayTools BAC BCRANK BGmix BSgenome BUS BicARE BioMVCClass Biobase BiocCaseStudies Biostrings BiostringsCinterfaceDemo BufferedMatrix BufferedMatrixMethods CALIB CAMERA CGHbase CGHcall CGHregions CMA CNTools CORREP Category ChIPpeakAnno ChemmineR CoCiteStats DAVIDQuery DEDS DFP DNAcopy DynDoc EBImage EBarrays GEOmetadb GEOquery GGBase GGexplorer GGtools GLAD GOSemSim GOstats GSEABase GSEAlm GeneMeta GeneR GeneRegionScan GeneRfold GeneSelectMMD GeneSelector GeneSpring GeneTraffic GeneticsBase GeneticsDesign GeneticsPed GenomeGraphs Genominator GlobalAncova GraphAT GraphAlignment HELP HEM Harshlight Heatplus HilbertCurveDisplay HilbertVis HilbertVisGUI IRanges ITALICS Icens KCsmart KEGGSOAP KEGGgraph LBE LMGene LPE LPEadj MANOR MCRestimate MEDME MLInterfaces MVCClass MantelCorr MassSpecWavelet MeasurementError.cor MergeMaid Mfuzz MiPP OCplus OLIN OLINgui OrderedList OutlierD PAnnBuilder PCpheno PGSEA PLPE PROcess RBGL RBioinf RDocBook RLMM RMAGEML RNAither RNAseq ROC RPA RSNPper RTools4TB RWebServices RankProd Ratlpow RbcBook1 Rdbi RdbiPgSQL Rdisop ReadMatcher RefPlus Resourcerer Rgraphviz Ringo Rintact Rmagpie RmiR Rolexa RpsiXML Rredland Rrefdb Rrsat Rsamtools Rswub Rtreemix Ruuid SAGElyzer SAGx SBMLR SIM SJava SLGI SLqPCR SMAP SNPchip SPIA SSPA ScISI SemSim ShortRead Starr TargetSearch TypeInfo VanillaICE XDE aCGH adSplit affxparser affy affyContam affyExonMuncher affyMvout affyPLM affyPara affyQCReport affycomp affycoretools affyio affylmGUI affypdnn altcdfenvs annaffy annotate annotationTools apComplex aroma.light aroma.tcga arrayMagic arrayMvout arrayQuality arrayQualityMetrics beadarray beadarraySNP betr bgafun bgx bioDist biocDatasets biocGraph biocSurvey biocViews biomaRt bridge buildBioC caFlowQ cellHTS cellHTS2 cghMCR chipseq clusterStab codelink codetoolsBioC convert copa cosmo cosmoGUI crlmm ctc daMA ddCt diffGeneAnalysis domainsignatures dualKS dyebias ecolitk edd edgeR epistasis exonmap explorase externalVector factDesign fbat fdrame flagme flowClust flowCore flowDB flowFP flowFlowJo flowMerge flowQ flowStats flowUtils flowViz gaga gaggle gcrma genArise gene2pathway geneRecommender genefilter geneplotter genomeIntervals globaltest goCluster goProfiles goTools gpls graph hexbin hopach hypergraph iFlow idiogram impute iterativeBMA iterativeBMAsurv keggorth lapmix limma limmaGUI logicFS logitT lumi maCorrPlot maDB maSigPro maanova macat made4 maigesPack makePlatformDesign makecdfenv marray matchprobes mdqc metaArray metahdep methylumi miRNApath microRNA minet multiscan multtest ncdfExts nem nnNorm nudge occugene oligo oligoClasses oneChannelGUI ontoTools pairseqsim pamr panp parody pathRender pcaMethods pcot2 pdInfoBuilder pdmclass pgUtils pickgene pkgDepTools plateCore plgem plier plw ppiStats prada preprocessCore prism puma qpcrNorm qpgraph quantsmooth qvalue rHVDM rMAT rama rbsurv reb rfcprim rflowcyt rhdf5 rnaSeqTests rsbml rtracklayer safe sagenhaft seqLogo sigPathway siggenes simpleaffy simulatorAPMS sizepower smoothMiner snapCGH snpMatrix spikeLI spkTools splicegear splots spotSegmentation sscore ssize stam stepNorm syslibGTK tilingArray timecourse tkWidgets topGO tspair twilight vbmp vsn weaver webbioc widgetInvoke widgetTools xcms xcmsGUI xmapbridge xps yaqcaffy
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